Microbiome Community Analysis Visualization

Microbiome Community Analysis

Upload the three community tables — an OTU/ASV abundance table, a taxonomy table, and a sample-metadata table (CSV or TSV) — as produced by QIIME 2, DADA2, mothur, or any other amplicon or metagenomics pipeline. Taxa are linked to taxonomy by their identifiers, and samples to metadata by their names. Any taxonomic rank scheme is supported.

Read the detailed guide here Guide

OTU / ASV / feature table

Click to select

abundance counts — rows = taxa, columns = samples (or transposed); first column = taxon id

Taxonomy table

Click to select

first column = taxon id, remaining columns = ranks (e.g. Domain … Genus)

Sample metadata table

Click to select

first column = sample name, remaining columns = sample variables

Try it now with a real dataset

205 photosynthetic taxa × 54 samples off Brazil [1]